gatk3的最后一个经典版本3.8

Mauricio Carneiro 6c17c50fa2 Updates to ReduceReads ... * Added optional parameter to not hard clip on the interval border * Made not clipping the default behavior (hence integration tests changed) * Updated integration tests.		2012-07-09 13:46:51 -04:00
licensing	Remove old licensing	2012-04-25 12:23:08 -04:00
protected/java	Updates to ReduceReads	2012-07-09 13:46:51 -04:00
public	Don't cast to a specific walker type since any walker can use the VA engine	2012-07-09 10:25:58 -04:00
settings	Rev tribble to 110. Log is:	2012-06-26 15:28:32 -04:00
.gitignore	Minor additions to the shared .gitignore file, now that Mark has checked one in.	2011-10-26 12:24:28 -04:00
build.xml	ant fasttest: for when you just can't wait	2012-06-01 15:17:18 -04:00
ivy.xml	Navel -> GXDB	2012-06-28 13:38:00 -04:00