gatk3的最后一个经典版本3.8

Guillermo del Angel 6b8bed34d0 Big bad bug fix: feature added to LeftAlignAndTrimVariants to left align multiallelic records didn't work. ... -- Corrected logic to pick biallelic vc to left align. -- Added integration test to make sure this feature is tested and feature to trim bases is also tested.		2013-03-30 19:31:28 -04:00
licensing	Removing the symlink from the private license file	2013-02-09 12:57:44 -05:00
protected	Big bad bug fix: feature added to LeftAlignAndTrimVariants to left align multiallelic records didn't work.	2013-03-30 19:31:28 -04:00
public	Big bad bug fix: feature added to LeftAlignAndTrimVariants to left align multiallelic records didn't work.	2013-03-30 19:31:28 -04:00
settings	Fixed issues raised by Appistry QA (mostly small fixes, corrections & clarifications to GATKDocs)	2013-03-12 10:57:14 -04:00
.gitignore	Fixing the licensing scripts	2013-01-26 13:42:49 -05:00
build.xml	Fix tests that were consistently or intermittently failing when run in parallel on the farm	2013-03-06 13:56:54 -05:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	Brought all of ReduceReads to fastutils	2013-02-23 22:53:23 -05:00