Geraldine Van der Auwera 6b4d88ebe9 Created ListAnnotations utility (extends CommandLineProgram) ... --Refactored listAnnotations basic method out of VA into HelpUtils --HelpUtils.listAnnotations() is now called by both VA and the new ListAnnotations utility (lives in sting.tools) --This way we keep the VA --list option but we also offer a way to list annotations without a full valid VA command-line, which was a pain users continually complained about --We could get rid of the VA --list option altogether ...?		2013-03-20 06:15:27 -04:00
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config	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
src	Created ListAnnotations utility (extends CommandLineProgram)	2013-03-20 06:15:27 -04:00
test	AssessNA12878 bugfixes	2013-03-18 15:48:08 -04:00