Guillermo del Angel 6a8cf1c84a Enable and adapt HaplotypeScore and MappingQualityZero as active region annotations now that we have per-read likelihoods passed in to annotations		2012-08-21 14:35:40 -04:00
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config	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
src	Enable and adapt HaplotypeScore and MappingQualityZero as active region annotations now that we have per-read likelihoods passed in to annotations	2012-08-21 14:35:40 -04:00
test	number of stashed changes are lurking in here. In order of importance:	2012-08-21 07:08:58 -04:00