ebanks 6a37090529 Output changes for VCF and UG: ... 1. Don't cap q-scores at 99 2. Scale SLOD to allow more resolution in the output 3. UG outputs weighted allele balance (AB) and on-off genotype (OO) info fields for het genotype calls (works for joint estimation model and SSG) git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2011 348d0f76-0448-11de-a6fe-93d51630548a		2009-11-10 16:31:31 +00:00
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config	Provide a default logger, some config settings, and some doc updates.	2009-04-29 02:06:05 +00:00
src/org/broadinstitute/sting	Output changes for VCF and UG:	2009-11-10 16:31:31 +00:00
test/org/broadinstitute/sting	Output changes for VCF and UG:	2009-11-10 16:31:31 +00:00