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gatk-3.8/java/test/org/broadinstitute/sting/gatk
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ebanks 69de3e51bf Better precision for the calculated AF value. Now looks at the total number of samples to determine how much precision is necessary. Also, changing default min BQ used for calling in UGv2 to Q17. 
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4655 348d0f76-0448-11de-a6fe-93d51630548a
 		2010-11-12 08:31:40 +00:00
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arguments Changing testing framework from junit -> testng, for its enhanced configurability. 2010-11-01 21:31:44 +00:00
contexts/variantcontext Convert GenomeLocParser into an instance variable. This change is required 2010-11-10 17:59:50 +00:00
datasources Convert GenomeLocParser into an instance variable. This change is required 2010-11-10 17:59:50 +00:00
executive Changing testing framework from junit -> testng, for its enhanced configurability. 2010-11-01 21:31:44 +00:00
filters Convert GenomeLocParser into an instance variable. This change is required 2010-11-10 17:59:50 +00:00
iterators Convert GenomeLocParser into an instance variable. This change is required 2010-11-10 17:59:50 +00:00
refdata Convert GenomeLocParser into an instance variable. This change is required 2010-11-10 17:59:50 +00:00
traversals Convert GenomeLocParser into an instance variable. This change is required 2010-11-10 17:59:50 +00:00
walkers Better precision for the calculated AF value. Now looks at the total number of samples to determine how much precision is necessary. Also, changing default min BQ used for calling in UGv2 to Q17. 2010-11-12 08:31:40 +00:00
WalkerManagerUnitTest.java Changing testing framework from junit -> testng, for its enhanced configurability. 2010-11-01 21:31:44 +00:00