gatk3的最后一个经典版本3.8

Mark DePristo 69bf70c42e Cleanup and more unit tests for RecalibrationTables in BQSR ... -- Added unit tests for combining RecalibrationTables. As a side effect now has serious tests for incrementDatumOrPutIfNecessary -- Removed unnecessary enum.index system from RecalibrationTables. -- Moved what were really static utility methods out of RecalibrationEngine and into RecalUtils.		2013-01-05 12:50:27 -05:00
licensing	Final final final version of the license.	2012-07-20 18:00:02 -04:00
protected/java	Remove AAL and update MD5s.	2013-01-04 16:46:14 -05:00
public	Cleanup and more unit tests for RecalibrationTables in BQSR	2013-01-05 12:50:27 -05:00
settings	Final r119 tribble jar	2012-11-02 14:30:33 -04:00
.gitignore	adding some directories to gitignore	2012-09-27 11:09:41 -04:00
build.xml	Re-enabling contracts in tests in build.xml	2013-01-02 11:29:25 -05:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	Use build jars in test classpaths by default	2012-11-28 22:57:04 -05:00