gatk3的最后一个经典版本3.8

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Valentin Ruano-Rubio 69bf2b3247 Added a more efficient implementation of the KBest haplotype finder code (CONT.) Changes: 1. Addressed review comments on new K-best haplotype assembly graph finder. 2. Generalize KBestHaplotypeFinder to deal with multiple source and sink vertices. 3. Updated test to use KBestHaplotypeFinder instead of KBestPaths 4. Retired KBestPaths to the archive. 5. Small improvements to the code and documentation.		2014-03-04 23:22:27 -05:00
licensing	deleted old license files	2013-07-02 16:36:47 -04:00
protected	Added a more efficient implementation of the KBest haplotype finder code (CONT.)	2014-03-04 23:22:27 -05:00
public	Added a more efficient implementation of the KBest haplotype finder code (CONT.)	2014-03-04 23:22:27 -05:00
settings/helpTemplates	Replaced local drmaa and Jama artifacts with versions from maven central.	2014-02-22 01:21:35 +08:00
.gitignore	Adding the external example to the build.	2014-02-15 01:26:07 +08:00
README.md	Update README file for the 2.6 release	2013-06-20 13:08:29 -04:00
ant-bridge.sh	Add ability to run *KnowledgeBaseTests to maven	2014-02-11 14:08:24 -05:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
pom.xml	Separate failsafe directories for each of the integration test types [#66515572 ]	2014-02-27 04:43:39 +08:00

The Genome Analysis Toolkit