Eric Banks 69b8173535 Replace uses of NestedHashMap with NestedIntegerArray. ... * Removed from codebase NestedHashMap since it is unused and untested. * Integration tests change because the BQSR CSV is now sorted automatically. * Resolves GSA-732		2013-02-27 14:03:39 -05:00
..
java	Replace uses of NestedHashMap with NestedIntegerArray.	2013-02-27 14:03:39 -05:00
scala/test/org/broadinstitute/sting/queue/pipeline/examples	Fix improper dependencies in QScripts used by pipeline tests, and attempt to fix the flawed MisencodedBaseQualityUnitTest	2013-02-27 04:45:53 -05:00