gatk3的最后一个经典版本3.8

Ryan Poplin 699a7801b6 Force the in-walker BAQ calculation to use the new BAQGOP parameter.		2012-09-12 14:59:31 -04:00
licensing	Revert unintentional license change	2012-08-09 17:10:47 -04:00
protected/java	Merge branch 'master' of ssh://gsa2.broadinstitute.org/humgen/gsa-scr1/gsa-engineering/git/unstable	2012-09-12 14:46:50 -04:00
public	My own integration test isn't passing with a clean checkout. This fix to the walker ought to do it.	2012-09-12 10:11:06 -04:00
settings	Updating cofoja to the latest version	2012-08-09 16:36:18 -04:00
.gitignore	a few more useful git ignores	2012-09-01 11:08:36 -04:00
build.xml	More memory for gatkdocs and extracthelp targets	2012-09-05 15:45:22 -04:00
ivy.xml	Updating cofoja to the latest version	2012-08-09 16:36:18 -04:00