hanna 6955b5bf53 Cleanup of the doc system, and introduce Kiran's concept of a detailed summary ... below the specific command-line arguments for the walker. Also introduced @help.summary to override summary descriptions if required. git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2337 348d0f76-0448-11de-a6fe-93d51630548a		2009-12-12 04:04:37 +00:00
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config	Provide a default logger, some config settings, and some doc updates.	2009-04-29 02:06:05 +00:00
src/org/broadinstitute/sting	Cleanup of the doc system, and introduce Kiran's concept of a detailed summary	2009-12-12 04:04:37 +00:00
test/org/broadinstitute/sting	Now that we always output the VCF header, make sure that we correctly handle the situation where there are no records in the file. Added unit tests as well.	2009-12-11 19:51:05 +00:00