David Roazen 68b2a0968c Updating the HybridSelectionPipeline for SnpEff 2.0.4 RC3 ... This will have to be done again when the 2.0.4 release becomes official, but it's necessary to do now in order to re-enable the pipeline tests.		2011-11-17 14:46:12 -05:00
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com.google.code.caliper	Killed sonatype repository; it's failed me too many times at this point.	2011-06-09 16:07:02 +00:00
com.google.code.cofoja	Fixing Contracts for Java, and enabling contracts by default for unit/integration tests.	2011-07-08 15:34:39 -04:00
edu.mit.broad	Picard upgrade to 1.55.	2011-10-24 17:02:27 -04:00
gov.nist	Adding Jama for Ryan.	2010-04-27 14:30:36 +00:00
net.sf	Picard upgrade to 1.55.	2011-10-24 17:02:27 -04:00
net.sf.gridscheduler	Switched GridEngine from looking from environment variable to using embedded jar.	2011-07-05 21:59:00 -04:00
net.sf.snpeff	Updating the HybridSelectionPipeline for SnpEff 2.0.4 RC3	2011-11-17 14:46:12 -05:00
org.broad	Instead of the SelfScopingFeatureCodec interface, pushed this functionality into Tribble itself. Now we can e.g. determine that a file can be parsed by the BedCodec on the fly.	2011-11-09 15:24:29 -05:00