gatk-3.8/archive/java/src/org/broadinstitute/sting
aaron 131703d9db more clean-up: moving AlleleBalanceInspector to archive.
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@3192 348d0f76-0448-11de-a6fe-93d51630548a
2010-04-16 20:53:33 +00:00
..
mendelian Moving to archive as it's no longer supported 2010-04-15 22:10:42 +00:00
multisamplecaller Moved old EM model to archive 2010-02-01 02:55:32 +00:00
oldepthofcoverage CoverageStatistics has now replaced DepthOfCoverage -- old DoC is in the archive. 2010-04-01 16:27:23 +00:00
oldindels Removing deprecated version of indel genotyper (putting it in archive in case we need to reproduce original 1KG indel calls for some reason). 2010-01-31 14:05:36 +00:00
oldsecondarybases Removing deprecated code and walkers for which I had the green light from repository. 2009-12-01 05:58:20 +00:00
AlleleBalanceInspector.java more clean-up: moving AlleleBalanceInspector to archive. 2010-04-16 20:53:33 +00:00
ConcordanceTruthTable.java No longer used 2010-04-16 17:57:39 +00:00
DSBWalker.java moving older versions of the oneoff project to archive, bye-bye 2010-02-04 19:46:27 +00:00
DSBWalkerV2.java moving older versions of the oneoff project to archive, bye-bye 2010-02-04 19:46:27 +00:00
DuplicateQualsWalker.java Home for retired duplicateQuals analysis utility 2010-01-06 15:05:00 +00:00
FisherStrand.java Move VariantAnnotator over to use a StratifiedAlignmentContext split by sample. 2009-12-11 05:28:28 +00:00
HapmapPoolAllelicInfoWalker.java No longer used 2010-04-16 17:57:39 +00:00