gatk-3.8/public
Christopher Hartl 67298f8a11 AFCR made public (for use in VSS)
Minor changes to ValidationSiteSelector logic (SampleSelectors determine whether a site is valid for output, no actual subset context need be operated on beyond that determination). Implementation of GL-based site selection. Minor changes to EJG.
2011-12-19 23:14:26 -05:00
..
R Protect ourselves when iteration is present but there's only a single iteration in queueJobReport.R 2011-12-19 10:08:38 -05:00
c Reinitialize random seed in the bwa bindings from the fixed seed stored in the 2011-07-22 13:41:53 -04:00
chainFiles
doc
java AFCR made public (for use in VSS) 2011-12-19 23:14:26 -05:00
packages Revved Picard to incorporate tfennell's AsyncSAMFileWriter. 2011-12-06 10:37:42 -05:00
perl Update to the bindings for liftOverVCF.pl (to -V from -B) 2011-09-15 15:33:09 -04:00
scala Removing cruft that snuck in last commit. 2011-12-16 23:00:16 -05:00
testdata Data Processing Pipeline Test 2011-12-12 00:24:51 -05:00