gatk3的最后一个经典版本3.8

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Mark DePristo 66e1b75118 Critical bugfix for OneChunkIterator -- Previous version used overlaps on the full GenomeLoc of the variant in the KB, which meant that deletions that didn't start in an interval would be included in an interval, which isn't the behavior of the tribble and so caused a mismatch when assessing variants in the knowledgebase		2013-08-07 08:08:37 -04:00
licensing	deleted old license files	2013-07-02 16:36:47 -04:00
protected	Merge pull request #364 from broadinstitute/md_vqsr_improvements	2013-08-07 04:37:45 -07:00
public	Several improvements to AssessNA12878 and KB	2013-08-07 08:08:37 -04:00
settings	Rev picard to get optimized tribble feature reads	2013-08-02 10:31:36 -04:00
.gitignore	Detect stuck lock-acquisition calls, and disable file locking for tests	2013-04-24 22:49:02 -04:00
README.md	Update README file for the 2.6 release	2013-06-20 13:08:29 -04:00
build.xml	build.xml: make ant -p output only important build targets	2013-07-19 14:35:00 -04:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	Brought all of ReduceReads to fastutils	2013-02-23 22:53:23 -05:00

The Genome Analysis Toolkit