gatk3的最后一个经典版本3.8

Eric Banks 66cbaaee31 Fixed nasty bug in BQSR csv file creation: ... numbers larger than 999 in the Errors column were printed out with commas (which looks like a separate column). This wasn't caught earlier because there are no integration tests covering the csv. I'll add one into unstable in a sec.		2012-11-09 08:33:55 -05:00
licensing	Revert unintentional license change	2012-08-09 17:10:47 -04:00
protected/java	Moving UG integration tests to protected since they use protected-only contamination filtering. Adding a new UGLite integration test to confirm that contamination filtering is ignored in lite.	2012-10-31 21:28:07 -04:00
public	Fixed nasty bug in BQSR csv file creation:	2012-11-09 08:33:55 -05:00
settings	Updated google reflections due to stale slf4j version conflicting with other projects also trying to use Queue as a component.	2012-10-16 02:22:30 -04:00
.gitignore	adding some directories to gitignore	2012-10-10 13:26:13 -04:00
build.xml	Refuse to package the GATK from a non-clean working directory	2012-11-02 19:11:24 -04:00
intellij_example.tar.bz2	Adding intellij example files to the repo	2012-10-15 13:49:09 -04:00
ivy.xml	Updated google reflections due to stale slf4j version conflicting with other projects also trying to use Queue as a component.	2012-10-16 02:22:30 -04:00