gatk3的最后一个经典版本3.8

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Valentin Ruano-Rubio 6695aeafd9 Disable physical phasing for non-diploid HC calling. Story: https://www.pivotaltracker.com/story/show/77452256 Changes: If ploidy != 2, disable physical phasing and log an info message to let the user know. Tests: Change md5s affected by this change.		2014-08-23 10:52:07 -04:00
licensing	deleted old license files	2013-07-02 16:36:47 -04:00
protected	Disable physical phasing for non-diploid HC calling.	2014-08-23 10:52:07 -04:00
public	Disable physical phasing for non-diploid HC calling.	2014-08-23 10:52:07 -04:00
settings/helpTemplates	Various documentation improvements	2014-07-14 12:03:03 -04:00
.gitignore	Fixed bug using GraphBased due to infinite likelihoods resulting from the calculation of alignment cost of very long insertion or deletions (done in linear scale)	2014-04-01 16:14:52 -04:00
README.md	Update README file for the 2.6 release	2013-06-20 13:08:29 -04:00
ant-bridge.sh	Refactored maven directories and java packages replacing "sting" with "gatk".	2014-05-19 17:36:39 -04:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
pom.xml	Update pom versions to mark the start of GATK 3.3 development	2014-07-17 12:09:33 -04:00

The Genome Analysis Toolkit