ebanks 6652b992f7 The new cleaner can now use known indels to create alternate consenses for cleaning. ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2816 348d0f76-0448-11de-a6fe-93d51630548a		2010-02-10 04:39:15 +00:00
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config	Provide a default logger, some config settings, and some doc updates.	2009-04-29 02:06:05 +00:00
src	The new cleaner can now use known indels to create alternate consenses for cleaning.	2010-02-10 04:39:15 +00:00
test/org/broadinstitute/sting	VariantContext to VCF converter. BeagleROD, and phasing of VCF calls. Integration tests galore :-)	2010-02-09 19:02:25 +00:00