gatk3的最后一个经典版本3.8

Guillermo del Angel 660fc120a3 QC fixes in fastq-bam: ... a) Connect picard outputs with @Output b) Do QC by default and correct picard path in instances. c) EXPERIMENTAL: bump up numThreads to 8 by default and see what happens DEV-155 #resolve #time 1m		2012-10-24 21:37:25 -04:00
licensing	Final final final version of the license.	2012-07-20 18:00:02 -04:00
protected/java	Updating RR integration tests	2012-10-23 11:26:26 -04:00
public	Sending a version of per job status messages.	2012-10-23 15:55:47 -04:00
settings	Updated google reflections due to stale slf4j version conflicting with other projects also trying to use Queue as a component.	2012-10-16 02:22:30 -04:00
.gitignore	adding some directories to gitignore	2012-09-27 11:09:41 -04:00
build.xml	Updated google reflections due to stale slf4j version conflicting with other projects also trying to use Queue as a component.	2012-10-16 02:22:30 -04:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	Updated google reflections due to stale slf4j version conflicting with other projects also trying to use Queue as a component.	2012-10-16 02:22:30 -04:00