kiran 653475ce12 Now finds the most likely configuration of genotypes given the genotype likelihoods and inheritance constraints. The parental genotypes are now phased as well (the alleles are ordered as A_transmitted|A_untransmitted). Rewrote the way the transmission probability is calculated. This will probably move into core soon. ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5859 348d0f76-0448-11de-a6fe-93d51630548a		2011-05-24 01:35:40 +00:00
..
config	Provide a default logger, some config settings, and some doc updates.	2009-04-29 02:06:05 +00:00
src	Now finds the most likely configuration of genotypes given the genotype likelihoods and inheritance constraints. The parental genotypes are now phased as well (the alleles are ordered as A_transmitted|A_untransmitted). Rewrote the way the transmission probability is calculated. This will probably move into core soon.	2011-05-24 01:35:40 +00:00
test	Reenabling E.coli ValidatingPileup with MV1994 realigned using the BWA/C bindings.	2011-05-23 21:32:53 +00:00