Mauricio Carneiro e89ff063fc GATKSAMRecord refactor ... The GATK engine will now provide a GATKSAMRecord to all tools which incorporates the functionality used by the GATK to the bam file (ReadGroups, Reduced Reads, ...). * No tools should create SAMRecord anymore, use GATKSAMRecord instead *		2011-11-03 15:43:26 -04:00
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DupUtils.java	GATKSAMRecord refactor	2011-11-03 15:43:26 -04:00
DuplicateComp.java	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00