gatk3的最后一个经典版本3.8

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Ron Levine 64375f6341 Messages that were going to stdout now going to stderr Make PairHMM outputs go to stderr instead of stdout Change output from stdout to stderr in close() Updated lib with output going to stderr		2014-12-23 11:03:29 -05:00
licensing	Updated license information	2014-10-14 17:10:12 -04:00
protected	Messages that were going to stdout now going to stderr	2014-12-23 11:03:29 -05:00
public	Messages that were going to stdout now going to stderr	2014-12-23 11:03:29 -05:00
settings/helpTemplates	Output JSON version of docs for Galaxy	2014-10-09 06:42:25 -04:00
.gitignore	Fixed bug using GraphBased due to infinite likelihoods resulting from the calculation of alignment cost of very long insertion or deletions (done in linear scale)	2014-04-01 16:14:52 -04:00
README.md	Update README file for the 2.6 release	2013-06-20 13:08:29 -04:00
ant-bridge.sh	Added faster built executable, non-packaged jars.	2014-11-05 00:30:46 +08:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
pom.xml	Faster builds, with updates to documentation generation.	2014-11-05 00:32:23 +08:00

The Genome Analysis Toolkit