jmaguire 641afc4e76 fix a crash in the event that the input file has no read groups! ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@714 348d0f76-0448-11de-a6fe-93d51630548a		2009-05-14 19:27:41 +00:00
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config	Provide a default logger, some config settings, and some doc updates.	2009-04-29 02:06:05 +00:00
src/org/broadinstitute/sting	fix a crash in the event that the input file has no read groups!	2009-05-14 19:27:41 +00:00
test/org/broadinstitute/sting	Moved the iterators over to the StingSAMIterator interface. This will help us ensure that iterators that need to be closed get closed.	2009-05-14 16:52:18 +00:00