gatk-3.8/java/test
delangel 00ac51acc8 Added several integration tests for UG indel caller:
- Basic
- Multiple technology
- Test minIndelCnt parameter

Added also 2 disabled tests:
- Parallelization: issue w/code right now is that if -nt > 1, filter field shows "PASS" instead to ".", cause TBD
- Genotype given alleles mode: code not working yet.



git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5404 348d0f76-0448-11de-a6fe-93d51630548a
2011-03-08 16:21:21 +00:00
..
net/sf/picard/reference A few minor modifications masquerading as significant changes according to 2011-02-03 17:59:19 +00:00
org/broadinstitute/sting Added several integration tests for UG indel caller: 2011-03-08 16:21:21 +00:00