..
VectorPairHMM
Update pom versions to mark the start of GATK 3.3 development
2014-07-17 12:09:33 -04:00
c
After renaming the packages, instead of updating the JNI library used for testing bwa, moving the classes to the archive.
2014-05-19 17:36:41 -04:00
chainFiles
The contig is named MT not M in b36. Delivers PT68890442.
2014-04-08 10:03:47 -04:00
doc
Refactored maven directories and java packages replacing "sting" with "gatk".
2014-05-19 17:36:39 -04:00
external-example
Update pom versions to mark the start of GATK 3.3 development
2014-07-17 12:09:33 -04:00
gatk-engine
Update pom versions to mark the start of GATK 3.3 development
2014-07-17 12:09:33 -04:00
gatk-queue
Update pom versions to mark the start of GATK 3.3 development
2014-07-17 12:09:33 -04:00
gatk-queue-extensions-generator
Update pom versions to mark the start of GATK 3.3 development
2014-07-17 12:09:33 -04:00
gatk-queue-extensions-public
Update GATK to work with latest htsjdk
2014-07-30 12:05:14 -04:00
gatk-root
Update GATK to work with latest htsjdk
2014-07-30 12:05:14 -04:00
gatk-tools-public
Update GATK to work with latest htsjdk
2014-07-30 12:05:14 -04:00
gatk-utils
Update pom versions to mark the start of GATK 3.3 development
2014-07-17 12:09:33 -04:00
gsalib
Update pom versions to mark the start of GATK 3.3 development
2014-07-17 12:09:33 -04:00
java /config
Refactored maven directories and java packages replacing "sting" with "gatk".
2014-05-19 17:36:39 -04:00
package-tests
Update pom versions to mark the start of GATK 3.3 development
2014-07-17 12:09:33 -04:00
perl
Fixing the liftover script to not require strict VCF header validation.
2013-11-07 09:02:17 -05:00
repo
Update GATK to work with latest htsjdk
2014-07-30 12:05:14 -04:00
src/main/scripts /shell
For now, executing the delete_maven_links.sh just ahead of creating the symbolic links during the process-test-resources phase.
2014-06-25 02:32:15 +08:00
pom.xml
Update pom versions to mark the start of GATK 3.3 development
2014-07-17 12:09:33 -04:00
4373922ee6