gatk3的最后一个经典版本3.8

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Khalid Shakir 639247ab48 Updated package-tests classpath, and allowing javac -cp <package>.jar. Package tests now hard coding just the gatk-framework tests jar, to include ONLY BaseTest, until the exclusions may be debugged. Removing cofoja's annotation service from the package jars, to allow javac -cp <package>.jar.		2014-03-17 05:47:59 -04:00
licensing	deleted old license files	2013-07-02 16:36:47 -04:00
protected	Merge pull request #558 from broadinstitute/rp_vqsr_nondeterminism_fix	2014-03-12 14:35:51 -04:00
public	Updated package-tests classpath, and allowing javac -cp <package>.jar.	2014-03-17 05:47:59 -04:00
settings/helpTemplates	Replaced local drmaa and Jama artifacts with versions from maven central.	2014-02-22 01:21:35 +08:00
.gitignore	Adding the external example to the build.	2014-02-15 01:26:07 +08:00
README.md	Update README file for the 2.6 release	2013-06-20 13:08:29 -04:00
ant-bridge.sh	Rename existing PipelineTests to QueueTests to prepare for upcoming push of new pipeline tests	2014-03-10 21:24:03 -04:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
pom.xml	Updated package-tests classpath, and allowing javac -cp <package>.jar.	2014-03-17 05:47:59 -04:00

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