zzh
/
gatk-3.8
1
0
Fork 0
Code Issues Pull Requests Packages Projects Releases Wiki Activity
gatk3的最后一个经典版本3.8
12,157 Commits
1 Branch
0 Tags
257 MiB
Java 95.8%
Scala 3.8%
R 0.2%
JavaScript 0.1%
 
 
 
 
Go to file
Eric Banks 6253ba164e Using --keepOriginalAC in SelectVariants was causing it to emit bad VCFs 
* This occurred when one or more alleles were lost from the record after selection
  * Discussed here: http://gatkforums.broadinstitute.org/discussion/comment/4718#Comment_4718
  * Added some integration tests for --keepOriginalAC (there were none before)
 		2013-04-05 00:53:28 -04:00
licensing Removing the symlink from the private license file 2013-02-09 12:57:44 -05:00
protected Using --keepOriginalAC in SelectVariants was causing it to emit bad VCFs 2013-04-05 00:53:28 -04:00
public Using --keepOriginalAC in SelectVariants was causing it to emit bad VCFs 2013-04-05 00:53:28 -04:00
settings Don't allow users to specify keys and IDs that contain angle brackets or equals signs (not allowed in VCF spec). 2013-04-05 00:52:32 -04:00
.gitignore Fixing the licensing scripts 2013-01-26 13:42:49 -05:00
build.xml Disable Contracts for Java for tests 2013-04-04 11:56:17 -04:00
intellij_example.tar.bz2 Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!) 2012-09-27 11:04:56 -04:00
ivy.xml Brought all of ReduceReads to fastutils 2013-02-23 22:53:23 -05:00