chartl 61d5daa65c EXTREME interval processing. Still undergoing testing. ... + GroupIntervals allows user-defined scattering (e.g. take an interval list file, split it into k smaller interval list files by number of lines) + ExpandIntervals expands the intervals, either by widening them, or allowing the definition for nearby intervals (e.g. flanks starting 1bp before and after, ending 10bp after that) + IntersectIntervals takes n interval lists, writes 1 interval list that is the n-way intersection of all of them git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4885 348d0f76-0448-11de-a6fe-93d51630548a		2010-12-20 19:42:50 +00:00
..
qscript	EXTREME interval processing. Still undergoing testing.	2010-12-20 19:42:50 +00:00
src	EXTREME interval processing. Still undergoing testing.	2010-12-20 19:42:50 +00:00
test/org/broadinstitute/sting/queue	Updated pipeline test to match Eric's changes in r4846.	2010-12-17 19:52:09 +00:00