gatk3的最后一个经典版本3.8

David Roazen 6197078c5d Disable Contracts for Java for tests ... -cofoja is not compatible with Java 7, so we're forced to disable it for now until a replacement can be found		2013-04-04 11:56:17 -04:00
licensing	Removing the symlink from the private license file	2013-02-09 12:57:44 -05:00
protected	Critical bug fix for the case of duplicate map calls in ActiveRegionWalkers with exome interval lists.	2013-04-03 13:15:30 -04:00
public	Critical bug fix for the case of duplicate map calls in ActiveRegionWalkers with exome interval lists.	2013-04-03 13:15:30 -04:00
settings	Fixed issues raised by Appistry QA (mostly small fixes, corrections & clarifications to GATKDocs)	2013-03-12 10:57:14 -04:00
.gitignore	Fixing the licensing scripts	2013-01-26 13:42:49 -05:00
build.xml	Disable Contracts for Java for tests	2013-04-04 11:56:17 -04:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	Brought all of ReduceReads to fastutils	2013-02-23 22:53:23 -05:00