gatk-3.8/scala/qscript
kshakir 618c69f8dc More updates to the CleanBamFile pipeline.
Added the a CommandLineFunction.jobDependencies that will explicitly force a function to wait for a file, even if the value isn't otherwise listed on an @Input.
More bug fixes and refactoring of functions.


git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4048 348d0f76-0448-11de-a6fe-93d51630548a
2010-08-17 14:59:42 +00:00
..
depristo 1kg script now works 2010-08-10 12:01:18 +00:00
examples Cleaning up Queue debugging output. 2010-08-13 15:54:08 +00:00
kshakir More updates to the CleanBamFile pipeline. 2010-08-17 14:59:42 +00:00
rpoplin Changed logging level to default at INFO instead of WARN. 2010-08-09 16:42:48 +00:00
fullCallingPipeline.q Re-add the 1KG trigger as a comp as well 2010-08-16 18:19:47 +00:00
recalibrate.scala More updates to the CleanBamFile pipeline. 2010-08-17 14:59:42 +00:00