Mark DePristo 5fc613f972 Better default partition types for walkers ... -- Added PartitionType.READ, and associated ReadScatterFunction. ReadScatterFunction is literally just ContigScatterFunction until someone wants to implement something better -- LocusWalkers (and subclasses RodWalkers and RefWalkers) are by default PartitionType.LOCUS.		2011-11-01 19:47:10 -04:00
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config	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
src	Better default partition types for walkers	2011-11-01 19:47:10 -04:00
test	Moving ReduceRead TAG to GATKSAMRecord	2011-11-01 17:12:09 -04:00