gatk-3.8/protected
Valentin Ruano-Rubio 385186e11b Makes GQ of Hom-Ref Blocks in GVCF output to be consistent with PLs
Story:
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  - https://www.pivotaltracker.com/story/show/83800586

Changes:
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  - In GVCFWriter GQ is now recalculated out of the fianl PL array for the block.

Testing:
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  - Updated affected integration test md5s
2014-12-07 16:45:32 -05:00
..
gatk-package-distribution Added faster built executable, non-packaged jars. 2014-11-05 00:30:46 +08:00
gatk-queue-extensions-distribution Disabling tests for Lsf706 specific functionality. 2014-11-04 01:31:18 +08:00
gatk-queue-package-distribution Added faster built executable, non-packaged jars. 2014-11-05 00:30:46 +08:00
gatk-tools-protected Makes GQ of Hom-Ref Blocks in GVCF output to be consistent with PLs 2014-12-07 16:45:32 -05:00
pom.xml Update pom versions to mark the start of GATK 3.4 development 2014-10-23 22:31:44 -04:00