Mark DePristo 5ec25797b3 Optimizations for BaseRecalibrator ... -- No longer computes at each update the overall read group table. Now computes this derived table only at the end of the computation, using the ByQual table as input. Reduces BQSR runtime by 1/3 in my test		2012-12-17 16:47:27 -05:00
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java	Optimizations for BaseRecalibrator	2012-12-17 16:47:27 -05:00