Eric Banks f994220617 Update the allele remapping code to handle the new spanning deletion allele. ... Now that Ron updated the GATK so that we use star to represent spanning deletions, we need to catch those cases in the code that remaps alleles. Otherwise, we try to pad the stars and that's just bad. Added test from actual failing data.		2015-06-29 17:58:22 -04:00
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src	Update the allele remapping code to handle the new spanning deletion allele.	2015-06-29 17:58:22 -04:00
pom.xml	Update pom versions to mark the start of GATK 3.5 development	2015-05-15 00:44:54 -04:00