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depristo 59083a47d5 Initial Analysis toolkit 
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4 348d0f76-0448-11de-a6fe-93d51630548a
 		2009-02-26 21:50:29 +00:00
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aligner Initial Analysis toolkit 2009-02-26 21:50:29 +00:00
cmdline Initial Analysis toolkit 2009-02-26 21:50:29 +00:00
directed Initial Analysis toolkit 2009-02-26 21:50:29 +00:00
filter Initial Analysis toolkit 2009-02-26 21:50:29 +00:00
genotype Initial Analysis toolkit 2009-02-26 21:50:29 +00:00
illumina Initial Analysis toolkit 2009-02-26 21:50:29 +00:00
importer/genotype Initial Analysis toolkit 2009-02-26 21:50:29 +00:00
io Initial Analysis toolkit 2009-02-26 21:50:29 +00:00
metrics Initial Analysis toolkit 2009-02-26 21:50:29 +00:00
quality Initial Analysis toolkit 2009-02-26 21:50:29 +00:00
reference Initial Analysis toolkit 2009-02-26 21:50:29 +00:00
sam Initial Analysis toolkit 2009-02-26 21:50:29 +00:00
util Initial Analysis toolkit 2009-02-26 21:50:29 +00:00
variation Initial Analysis toolkit 2009-02-26 21:50:29 +00:00
PicardException.java Initial Analysis toolkit 2009-02-26 21:50:29 +00:00