46 lines
1.4 KiB
Tcsh
Executable File
46 lines
1.4 KiB
Tcsh
Executable File
#!/bin/tcsh
|
|
|
|
# download CLI tools
|
|
# http://aws.amazon.com/developertools/AWS-Identity-and-Access-Management/4143
|
|
|
|
setenv JAVA_HOME /usr/
|
|
setenv AWS_IAM_HOME ~/Downloads/IAMCli-1.1.0
|
|
setenv PATH $AWS_IAM_HOME/bin:$PATH
|
|
setenv AWS_CREDENTIAL_FILE /Users/depristo/Desktop/broadLocal/GATK/trunk/account-key
|
|
|
|
setenv CREATE_GROUPS false
|
|
setenv CREATE_IGV_USER false
|
|
setenv UPDATE_USER_KEYS false
|
|
setenv UPDATE_USER_POLICY true
|
|
|
|
# Create the administrators group:
|
|
# we aren't actually using this, in fact
|
|
if ( $CREATE_GROUPS == true ) then
|
|
iam-groupcreate -g Admins
|
|
iam-grouplistbypath
|
|
iam-groupuploadpolicy -g Admins -p AdminsGroupPolicy -f GroupPolicy.txt
|
|
iam-grouplistpolicies -g Admins
|
|
endif
|
|
|
|
# Create the IGV user -- uncomment if the IGV user needs to be created from scratch
|
|
# update the secret key
|
|
if $CREATE_IGV_USER == true then
|
|
iam-usercreate -u IGV -k -v > IGV_cred.txt
|
|
endif
|
|
|
|
# the user access and secret keys are in the IGV source file IGVRunReport.java
|
|
# and must be updated to be the most current ones
|
|
if $UPDATE_USER_KEYS == true then
|
|
iam-userdelkey -u IGV -k $1 # $1 -> current access key
|
|
iam-useraddkey -u IGV > IGV_cred.txt
|
|
cat IGV_cred.txt
|
|
endif
|
|
|
|
echo "IGV user policies"
|
|
if $UPDATE_USER_POLICY == true then
|
|
echo "Deleting policy"
|
|
iam-userdelpolicy -u IGV -p IGVRunReportUploading
|
|
iam-useruploadpolicy -u IGV -p IGVRunReportUploading -f IGVPolicy.txt
|
|
endif
|
|
iam-userlistpolicies -u IGV -v
|