is an output stream, we'll automatically create it and point it to stdout. Otherwise, we'll leave it empty. I think about it like this: marking a field 'required' indicates to the GATK that the walker author requires a value for this field, and if the GATK can provide one without end user intervention, it will. Maybe this is hackish. We'll try it and see. git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4091 348d0f76-0448-11de-a6fe-93d51630548a |
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