gatk-3.8/java
hanna 5d6a6420a9 New behavior for filling it output streams: if required==true for a field and the field
is an output stream, we'll automatically create it and point it to stdout.  Otherwise, 
we'll leave it empty.  
I think about it like this: marking a field 'required' indicates to the GATK that the 
walker author requires a value for this field, and if the GATK can provide one without 
end user intervention, it will.  Maybe this is hackish.  We'll try it and see.


git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4091 348d0f76-0448-11de-a6fe-93d51630548a
2010-08-23 23:39:13 +00:00
..
config Provide a default logger, some config settings, and some doc updates. 2009-04-29 02:06:05 +00:00
src New behavior for filling it output streams: if required==true for a field and the field 2010-08-23 23:39:13 +00:00
test Minor fixes for my last commit 2010-08-23 23:25:29 +00:00