hanna 7a22f19366 More descriptive error when VerifyingSamIterator hits an inconsistent alignment. Also updated ... case UserException.MalformedBAM to match case of UserExceptio.MissortedBAM for consistency and ease-of-use. git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5364 348d0f76-0448-11de-a6fe-93d51630548a		2011-03-03 03:55:24 +00:00
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net/sf/picard/reference	A few minor modifications masquerading as significant changes according to	2011-02-03 17:59:19 +00:00
org/broadinstitute/sting	More descriptive error when VerifyingSamIterator hits an inconsistent alignment. Also updated	2011-03-03 03:55:24 +00:00