hanna 5d4bbf41fb Behave intelligently in the deepest levels of GATK record filtration when ... we find a read flagged as 'mapped' in the unmapped region at the end of the file. git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5365 348d0f76-0448-11de-a6fe-93d51630548a		2011-03-03 04:52:55 +00:00
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net/sf	Fixed performance issue in protosharding code -- turns out that the index	2011-02-28 17:32:12 +00:00
org/broadinstitute/sting	Behave intelligently in the deepest levels of GATK record filtration when	2011-03-03 04:52:55 +00:00