gatk3的最后一个经典版本3.8

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Kristian Cibulskis 5ceb63cc35 created panel of normals queue creation script and instructions increased runtime java memory, changed default PON for NN to be new ICE PON updated FP rates, when using new default PON. SNPs up by ~3%, INDELs down by 40% updated git hash reference updated git hash reference		2015-06-02 16:23:10 -04:00
licensing	Updated license information	2014-10-14 17:10:12 -04:00
protected	Merge pull request #985 from broadinstitute/sa_refactor_cleansing_hack_negative_zeros_973_depends_on_841	2015-05-23 00:02:52 -04:00
public	Merge pull request #997 from broadinstitute/eb_add_foreign_read_filter	2015-05-22 14:34:28 -04:00
settings/helpTemplates	Numerous doc fixes; mostly formatting and clarifications	2015-05-03 00:28:46 +02:00
.gitignore	Fixed bug using GraphBased due to infinite likelihoods resulting from the calculation of alignment cost of very long insertion or deletions (done in linear scale)	2014-04-01 16:14:52 -04:00
README.md	Update README file for the 2.6 release	2013-06-20 13:08:29 -04:00
ant-bridge.sh	Added faster built executable, non-packaged jars.	2014-11-05 00:30:46 +08:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
pom.xml	Update pom versions to mark the start of GATK 3.5 development	2015-05-15 00:44:54 -04:00

The Genome Analysis Toolkit