kshakir 5cdd7a7ba4 There's no such thing as a sam index, so the GATK extension generator doesn't need to add an @Input for them. ... Updated a call to swapExt to specify the directory. git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4586 348d0f76-0448-11de-a6fe-93d51630548a		2010-10-27 20:39:03 +00:00
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config	Provide a default logger, some config settings, and some doc updates.	2009-04-29 02:06:05 +00:00
src	There's no such thing as a sam index, so the GATK extension generator doesn't need to add an @Input for them.	2010-10-27 20:39:03 +00:00
test	Get rid of the static cache of ArgumentTypeDescriptors by making them an integral part of the	2010-10-27 19:44:55 +00:00