gatk3的最后一个经典版本3.8

Mauricio Carneiro 5c9b659c02 clipping both ends of the reads was modifying the original read ... This goes against the ReadClipper contract, and was affecting the second part of the read that spans over multiple intervals. Fixed.		2011-09-28 16:07:34 -04:00
public	clipping both ends of the reads was modifying the original read	2011-09-28 16:07:34 -04:00
settings	Merged bug fix from Stable into Unstable	2011-09-27 14:34:39 -04:00
LICENSE	One last test...	2011-06-28 19:18:17 -04:00
build.xml	To work around potential problem with invalid javax.mail 1.4.1 in ivy cache, added explicit javax.mail 1.4.4 along with build.xml code to remove 1.4.1.	2011-09-20 00:14:35 -04:00
ivy.xml	Fixed Ant / PluginManager issue where reflections was picking up all class files under current working directory due to "." in jar manifest classpaths.	2011-09-27 14:33:57 -04:00