gatk-3.8/protected
Ryan Poplin 856c1f87c1 Allow for additional input data to be used in the VQSR for clustering but don't carry it forward into the output VCF file.
-- New -a argument in the VQSR for specifying additional data to be used in the clustering
-- New NA12878KB walker which creates ROC curves by partitioning the data along VQSLOD and calculating how many KB TP/FP's are called.
2014-01-02 14:46:04 -05:00
..
java Allow for additional input data to be used in the VQSR for clustering but don't carry it forward into the output VCF file. 2014-01-02 14:46:04 -05:00
scala/test/org/broadinstitute/sting/queue/pipeline/examples Fix improper dependencies in QScripts used by pipeline tests, and attempt to fix the flawed MisencodedBaseQualityUnitTest 2013-02-27 04:45:53 -05:00