gatk3的最后一个经典版本3.8

Go to file

Joseph White 5be8bc5dfc Deprecate --mergeVariantsViaLD in HC New unit test for deprecated mergeVariantsViaLD Update HaplotypeCallerIntegrationTest.java Delete duplicate testHaplotypeCallerMergeVariantsViaLDException test.		2015-05-08 17:50:25 -04:00
licensing	Updated license information	2014-10-14 17:10:12 -04:00
protected	Deprecate --mergeVariantsViaLD in HC	2015-05-08 17:50:25 -04:00
public	Moved MQ0 out of HC exclusion and into StandardUGAnnotation	2015-05-03 01:04:49 +02:00
settings/helpTemplates	Numerous doc fixes; mostly formatting and clarifications	2015-05-03 00:28:46 +02:00
.gitignore	Fixed bug using GraphBased due to infinite likelihoods resulting from the calculation of alignment cost of very long insertion or deletions (done in linear scale)	2014-04-01 16:14:52 -04:00
README.md	Update README file for the 2.6 release	2013-06-20 13:08:29 -04:00
ant-bridge.sh	Added faster built executable, non-packaged jars.	2014-11-05 00:30:46 +08:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
pom.xml	Faster builds, with updates to documentation generation.	2014-11-05 00:32:23 +08:00

The Genome Analysis Toolkit