zzh
/
gatk-3.8
1
0
Fork 0
Code Issues Pull Requests Packages Projects Releases Wiki Activity
gatk-3.8/public/java/test/org/broadinstitute/sting/utils/clipreads
History
Mauricio Carneiro 5bba44d693 Added hardClipByReferenceCoordinates UnitTest for the ReadClipper 
* fixed edge case when requested to hard clip beginning of a read that had hanging soft clipped bases on the left tail.
* fixed edge case when requested to hard clip end of a read that had hanging soft clipped bases on the right tail.
* fixed AlignmentStart of a clipped read that results in only hard clips and soft clips

note: added tests to all these beautiful cases...
 		2011-12-16 18:01:33 -05:00
..
ClipReadsTestUtils.java Refactor of ReadClipper unit tests 2011-12-15 19:05:43 -05:00
ClippingOpUnitTest.java Refactor of ReadClipper unit tests 2011-12-15 19:05:43 -05:00
ReadClipperUnitTest.java Added hardClipByReferenceCoordinates UnitTest for the ReadClipper 2011-12-16 18:01:33 -05:00