chartl 5b2a1e483e Renamed SequenomToVCF as PlinkToVCF. Wiki will be changed accordingly. ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2649 348d0f76-0448-11de-a6fe-93d51630548a		2010-01-21 17:35:20 +00:00
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alignment	Misc bug fixes.	2010-01-05 14:48:19 +00:00
analyzecovariates	Initial checkin of skeleton code for AnalyzeAnnotations	2010-01-15 21:52:34 +00:00
gatk	Better handling of enums by the command-line argument system.	2010-01-20 21:36:46 +00:00
oneoffprojects	First version of the tool that tries determining indel error rate (basically, counts indels that look like sequencing/alignment errors - such as a single observation at deeply covered locus, and reports the rate of their occurence)	2010-01-21 15:28:20 +00:00
playground	Renamed SequenomToVCF as PlinkToVCF. Wiki will be changed accordingly.	2010-01-21 17:35:20 +00:00
utils	Better handling of enums by the command-line argument system.	2010-01-20 21:36:46 +00:00