gatk-3.8/public/java/test/org/broadinstitute/sting
Mark DePristo 21dd70ed36 Test to ensure that ReadBasedReferenceOrderedView produces stateless objects
-- Stateless objects are required for nano-scheduling.  This means you can take the RefMetaDataTracker provided by ReadBasedReferenceOrderedView, store it way, get another from the same view, and the original one behaves the same.
2012-08-30 10:15:11 -04:00
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commandline Cleanup of VCF header lines and constants, BCF2 bugfixes 2012-06-21 15:16:31 -04:00
gatk Test to ensure that ReadBasedReferenceOrderedView produces stateless objects 2012-08-30 10:15:11 -04:00
jna Updated hard limit MathUtils.MAXN number of samples from 11,000 to 50,000. 2012-05-29 11:18:22 -04:00
utils RecalDatums now hold doubles so the test for equality needs an epsilon. 2012-08-28 16:00:52 -04:00
BaseTest.java Extensive unit tests, contacts, and documentation for RecalDatum 2012-07-31 08:11:03 -04:00
MD5DB.java Finalizing BCF2 mark III commit 2012-06-21 15:16:27 -04:00
MD5Mismatch.java Final updates to integration tests for BCF2 2012-05-24 10:58:59 -04:00
StingTextReporter.java Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
WalkerTest.java On the way to really sorting out HMS error handling 2012-07-25 22:11:10 -04:00