Mark DePristo 564fe36d22 VariantRecalibrator's VQSR.vcf now contains NEG/POS labels ... -- It's useful to know which sites have been used in the training of the model. The recal_file emitted by VR now contains VCF info field annotations labeling each site that was used in the positive or negative training models with POSITIVE_TRAINING_SITE and/or NEGATIVE_TRAINING_SITE -- Update MD5s, which all changed now that the recal file and the resulting applied vcfs all have these pos / neg labels		2013-04-16 09:09:47 -04:00
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gatk/walkers	VariantRecalibrator's VQSR.vcf now contains NEG/POS labels	2013-04-16 09:09:47 -04:00
utils	Slightly improved Smith-Waterman parameter values for HaplotypeCaller Path comparisons	2013-04-11 18:22:55 -04:00