Christopher Hartl 5a142fe265 After dicussion with Ryan/Eric, the Structural_Indel variant type is now gone, and has been entirely replaced with the access pattern .isStructuralIndel(). This makes it a strict subtype of indel. I agree that this method is a bit more sensible. ... In addition, fix for GSA-310. If supplied -rf argument does not match a known read filter, the list of read filters will be printed, and users directed to the documentation for more information.		2012-08-30 17:57:31 -04:00
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src	After dicussion with Ryan/Eric, the Structural_Indel variant type is now gone, and has been entirely replaced with the access pattern .isStructuralIndel(). This makes it a strict subtype of indel. I agree that this method is a bit more sensible.	2012-08-30 17:57:31 -04:00
test	Test to ensure that ReadBasedReferenceOrderedView produces stateless objects	2012-08-30 10:15:11 -04:00