gatk-3.8/protected
Laura Gauthier 5a10758e2e Annotation changes for M2:
Build a ReferenceContext in ActiveRegionWalkers to pass in to annotation engine so we can call the TandemRepeatAnnotator from M2
Make TandemRepeatAnnotator default annotation for M2.
Setup (but don't use yet) HC-style contamination downsampling.
New HC integration test with TandemRepeatAnnotator
2015-03-27 18:25:23 -04:00
..
gatk-package-distribution Added faster built executable, non-packaged jars. 2014-11-05 00:30:46 +08:00
gatk-queue-extensions-distribution Regression: The new 'includeUnmapped' PartitionBy annotation was incorrectly set for HC 2015-03-13 00:24:57 -04:00
gatk-queue-package-distribution Added faster built executable, non-packaged jars. 2014-11-05 00:30:46 +08:00
gatk-tools-protected Annotation changes for M2: 2015-03-27 18:25:23 -04:00
pom.xml Update pom versions to mark the start of GATK 3.4 development 2014-10-23 22:31:44 -04:00